Collecting and Transporting *Helicoverpa* Samples Between Laboratories
Collection at a collaborating lab and transport to the home lab of any *Helicoverpa* life stage (egg, larva, pupa, adult) and associated plant tissue or frass for genetics, morphology, or colony work.
sample_prepVersion History
Version 1 Current
Effective: 2025-11-06First version.
Procedure Steps (Version 1)
Regulatory prerequisites
- Institutional biosafety approval and risk assessment on file.
- If samples are alive or cross state/national borders: obtain permits under the Biosecurity Act 2015 and relevant state biosecurity laws, and follow courier/IATA rules (incl. dry ice UN1845 marking).
- Confirm whether ethanol volumes are allowed by the carrier. Prefer RNAlater, freezing, or “no free liquid” shipping for air.
- Confirm receiving lab containment (PC2 insectary for live Helicoverpa armigera).
Roles
- Collector: Performs collection, labeling, primary preservation.
- Sender: Packages, completes manifest, dispatches.
- Receiver: Accepts shipment, verifies integrity, logs into LIMS, initiates quarantine procedures.
Safety
- Treat Helicoverpa as an agricultural pest. Prevent escape at all times.
- PPE: lab coat, gloves, eye protection.
- Decontaminate surfaces and tools with 70% ethanol or 0.5–1% bleach then water rinse.
- Waste: autoclave or freeze-kill then seal for disposal per local rules.
Materials
- Preprinted barcodes or waterproof labels; indelible marker.
- Forceps, paintbrush, aspirator, fine scissors.
- Leak-proof screw-cap tubes (2–15 mL) with O-rings; vented insect containers for live transport.
- Preservatives: 95–100% ethanol (DNA) or RNAlater (RNA).
- Absorbent tissue, zip bags, secondary watertight containers, rigid outer box/cooler.
- Cold packs; optional dry ice or liquid nitrogen dry shipper.
- Chain-of-custody (CoC) form and sample manifest.
Pre-trip preparation (Sender)
- Exchange permits and approvals; confirm receiving address and responsible person.
- Pre-assign Sample IDs and barcodes. Prepare manifest with fields in Section 7.
- Calibrate GPS or note precise site/lab room coordinates where collected.
- Stage clean collection area, dedicated tools, and labeled containers.
Collection at the collaborating lab (Collector)
General steps
- Don PPE. Lay down clean bench-liner.
- One sample = one unique ID. Label before transfer.
- Avoid cross-contamination: change gloves and tools or flame/EtOH clean between samples.
- Record metadata immediately (Section 7).
By objective
A. DNA (genomics)
- Small larvae/eggs: place whole in 95–100% EtOH at ≥1:10 tissue:ethanol.
- Larger larvae/pupae: cut 1–3 mm tissue tip; submerge in EtOH. Optionally change EtOH after 12–24 h.
- Keep cold but above freezing; no dry ice inside primary tube.
B. RNA (transcriptomics)
- Submerge in RNAlater per manufacturer volume; hold 4 °C overnight, then cold ship or freeze.
- For large larvae, dissect a small piece; avoid overfilling.
C. Live colony transfer
- Only with permits and receiving insectary.
- Place ≤10 larvae per ventilated container with untreated host leaves and a damp paper square. No soil. No free water.
- Label container “LIVE PEST INSECTS—DO NOT OPEN.”
D. Morphology
- Kill by freezing or brief EtOH immersion. Keep specimens straight; support with tissue.
E. Associated materials
- Host leaf with eggs: slide into vented container; avoid crushing.
- Frass/plant swabs: 2 mL tube, dry or in RNAlater depending on analysis.
Packaging for transport (Sender)
Triple containment (all preserved material)
- Primary: sealed screw-cap tube; Parafilm the cap; add absorbent.
- Secondary: watertight zip bag or secondary container with more absorbent.
- Outer: rigid box or cooler with cushioning. Include printed manifest outside the secondary but inside the outer.
Temperature
- DNA in EtOH: cold packs OK.
- RNA in RNAlater: cold packs or frozen packs; dry ice allowed if compliant with UN1845 marking and net weight on the box.
- Frozen without liquid: ship on dry ice or in a dry shipper.
- Live: room-temp with cool pack buffer if hot. Never chill below ~8 °C for larvae.
Labels and documents
- Outer box: sender/receiver, emergency phone, “Biological Samples—Non-hazardous, Non-infectious,” temperature instructions, and dry ice label if used.
- Include permits and CoC copy.
Dispatch
- Use overnight service. Avoid weekend holds. Share tracking with Receiver.
Receipt and quarantine (Receiver)
- Inspect outer box for damage and correct labels. Photograph if damaged.
- In a containment area: open secondary, verify no leaks/escapes.
- Reconcile items with manifest. Sign CoC.
- Live samples: move immediately to PC2 insectary/quarantine cage. Record survival and condition.
- Preserved samples: log temperatures and condition; move to −20 °C (DNA) or −80 °C (RNA) storage. Replace EtOH with fresh if cloudy.
- Decontaminate packaging surfaces and dispose per waste plan.
- Enter all records into LIMS and assign storage locations.
Metadata to record (minimum)
Sample ID, taxonomy (Helicoverpa sp., life stage, instar if known), condition (live/frozen/EtOH/RNAlater), host plant species/part, collector, source lab, date/time, room/location (GPS or building/room), rearing or pesticide exposure history, preservation type and volume, temperature at sealing and at receipt, permits/approval numbers, intended analyses. Optional: photo, mass/length, notes.
Chain-of-custody (CoC) and manifest
CoC line item
- Sample ID → Sender name/sign/date/time → Courier tracking → Receiver name/sign/date/time → Condition notes.
Manifest columns Sample ID | Taxon | Life stage | Preservation | Quantity | Container type | Temp requirement | Source lab/room | Host plant | Notes | Permit IDs.
Waste and decontamination
- Plant material, frass, disposable tools: autoclave or freeze-kill then sealed disposal.
- EtOH waste: flammable-liquid container for chemical disposal.
- Surfaces and reusable tools: 70% EtOH or 0.5–1% bleach then water rinse; dry.
Records and retention
- Keep permits, manifests, CoC, temperature logs, and incident reports ≥5 years or per institutional policy.
- Version this SOP; review annually.
Notes
- Regulations vary by jurisdiction and carrier. Verify permits and packaging rules before each transfer.
- When in doubt about ethanol in air cargo, fix specimens, decant to minimal residual liquid, and ship cold or frozen, or use RNAlater.