AMPure XP 1.5 kb size selection of C57/DBA PCR-cDNA libraries
0.4x AMPure XP bead size selection to enrich for fragments >1.5 kb from barcoded PCR-cDNA libraries (bc19-24). Performed on libraries from process #97 prior to second nanopore sequencing run.
Status
Completed
✓
Files
0
📎
Team
0
👥
Used in Studies
1
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Process Details
- Process ID
#118- Category
- Sample_prep
- Process Date
- May 1, 2023
- Created
- February 23, 2026 am 08:31
- Locked
- Yes
Used in 1 research study:
- Strain-specific cortex gene expression and isoform usage (C57BL/6 and DBA/2 Mouse Cortex Transcriptomics)
Created Samples 6
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C57_rep1_bc19_1.5kb
C57 rep1 bc19 library after 1.5 kb bead selection
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C57_rep2_bc20_1.5kb
C57 rep2 bc20 library after 1.5 kb bead selection
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C57_rep3_bc21_1.5kb
C57 rep3 bc21 library after 1.5 kb bead selection
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DBA_rep1_bc22_1.5kb
DBA rep1 bc22 library after 1.5 kb bead selection
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DBA_rep2_bc23_1.5kb
DBA rep2 bc23 library after 1.5 kb bead selection
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DBA_rep3_bc24_1.5kb
DBA rep3 bc24 library after 1.5 kb bead selection
Source Samples 6
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C57_rep1_bc19
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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C57_rep2_bc20
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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C57_rep3_bc21
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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DBA_rep1_bc22
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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DBA_rep2_bc23
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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DBA_rep3_bc24
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
C57_rep1_bc19_1.5kb
Sample #446Source Samples (Parents) 1
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C57_rep1_bc19
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
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C57_DBA_pool_25fmol
via Process #116 — Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries
All Ancestors 4
- └─ C57_rep1_bc19 L1 via Process #97
- └─ 1-R L2 via Process #111
- └─ 1-C57-CORTEX L3 via Process #115
- └─ C57-1 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_25fmol L1 via Process #116
C57_rep2_bc20_1.5kb
Sample #447Source Samples (Parents) 1
-
C57_rep2_bc20
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_25fmol
via Process #116 — Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries
All Ancestors 4
- └─ C57_rep2_bc20 L1 via Process #97
- └─ 2-R L2 via Process #111
- └─ 2-C57-CORTEX L3 via Process #115
- └─ C57-2 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_25fmol L1 via Process #116
C57_rep3_bc21_1.5kb
Sample #448Source Samples (Parents) 1
-
C57_rep3_bc21
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_25fmol
via Process #116 — Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries
All Ancestors 4
- └─ C57_rep3_bc21 L1 via Process #97
- └─ 3-R L2 via Process #111
- └─ 3-C57-CORTEX L3 via Process #115
- └─ C57-3 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_25fmol L1 via Process #116
DBA_rep1_bc22_1.5kb
Sample #449Source Samples (Parents) 1
-
DBA_rep1_bc22
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_25fmol
via Process #116 — Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries
All Ancestors 4
- └─ DBA_rep1_bc22 L1 via Process #97
- └─ 7-R L2 via Process #111
- └─ 1-DBA-CORTEX L3 via Process #115
- └─ DBA-1 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_25fmol L1 via Process #116
DBA_rep2_bc23_1.5kb
Sample #450Source Samples (Parents) 1
-
DBA_rep2_bc23
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_25fmol
via Process #116 — Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries
All Ancestors 4
- └─ DBA_rep2_bc23 L1 via Process #97
- └─ 8-R L2 via Process #111
- └─ 2-DBA-CORTEX L3 via Process #115
- └─ DBA-2 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_25fmol L1 via Process #116
DBA_rep3_bc24_1.5kb
Sample #451Source Samples (Parents) 1
-
DBA_rep3_bc24
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_25fmol
via Process #116 — Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries
All Ancestors 4
- └─ DBA_rep3_bc24 L1 via Process #97
- └─ 9-R L2 via Process #111
- └─ 3-DBA-CORTEX L3 via Process #115
- └─ DBA-3 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_25fmol L1 via Process #116
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