PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (run 3, bc10-15)
Re-amplification of existing cDNA from original lib prep with new barcodes (bc10-15) for a third sequencing run. PCR from old cDNAs, not a fresh reverse transcription.
Status
Completed
✓
Files
0
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Team
0
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Used in Studies
1
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Process Details
- Process ID
#121- Category
- Sample_prep
- Process Date
- May 9, 2023
- Created
- February 23, 2026 am 08:55
- Locked
- Yes
Used in 1 research study:
- Strain-specific cortex gene expression and isoform usage (C57BL/6 and DBA/2 Mouse Cortex Transcriptomics)
Created Samples 6
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C57_rep1_bc10
C57 rep1 re-barcoded library (bc10) from existing cDNA
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C57_rep2_bc11
C57 rep2 re-barcoded library (bc11) from existing cDNA
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C57_rep3_bc12
C57 rep3 re-barcoded library (bc12) from existing cDNA
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DBA_rep1_bc13
DBA rep1 re-barcoded library (bc13) from existing cDNA
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DBA_rep2_bc14
DBA rep2 re-barcoded library (bc14) from existing cDNA
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DBA_rep3_bc15
DBA rep3 re-barcoded library (bc15) from existing cDNA
Source Samples 6
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C57_rep1_bc19
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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C57_rep2_bc20
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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C57_rep3_bc21
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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DBA_rep1_bc22
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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DBA_rep2_bc23
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
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DBA_rep3_bc24
Origin: Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
C57_rep1_bc10
Sample #453Source Samples (Parents) 1
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C57_rep1_bc19
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
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C57_DBA_pool_run3
via Process #122 — Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
All Ancestors 4
- └─ C57_rep1_bc19 L1 via Process #97
- └─ 1-R L2 via Process #111
- └─ 1-C57-CORTEX L3 via Process #115
- └─ C57-1 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_run3 L1 via Process #122
C57_rep2_bc11
Sample #454Source Samples (Parents) 1
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C57_rep2_bc20
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_run3
via Process #122 — Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
All Ancestors 4
- └─ C57_rep2_bc20 L1 via Process #97
- └─ 2-R L2 via Process #111
- └─ 2-C57-CORTEX L3 via Process #115
- └─ C57-2 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_run3 L1 via Process #122
C57_rep3_bc12
Sample #455Source Samples (Parents) 1
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C57_rep3_bc21
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_run3
via Process #122 — Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
All Ancestors 4
- └─ C57_rep3_bc21 L1 via Process #97
- └─ 3-R L2 via Process #111
- └─ 3-C57-CORTEX L3 via Process #115
- └─ C57-3 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_run3 L1 via Process #122
DBA_rep1_bc13
Sample #456Source Samples (Parents) 1
-
DBA_rep1_bc22
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_run3
via Process #122 — Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
All Ancestors 4
- └─ DBA_rep1_bc22 L1 via Process #97
- └─ 7-R L2 via Process #111
- └─ 1-DBA-CORTEX L3 via Process #115
- └─ DBA-1 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_run3 L1 via Process #122
DBA_rep2_bc14
Sample #457Source Samples (Parents) 1
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DBA_rep2_bc23
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_run3
via Process #122 — Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
All Ancestors 4
- └─ DBA_rep2_bc23 L1 via Process #97
- └─ 8-R L2 via Process #111
- └─ 2-DBA-CORTEX L3 via Process #115
- └─ DBA-2 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_run3 L1 via Process #122
DBA_rep3_bc15
Sample #458Source Samples (Parents) 1
-
DBA_rep3_bc24
via Process #97 — PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived Samples (Children) 1
-
C57_DBA_pool_run3
via Process #122 — Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
All Ancestors 4
- └─ DBA_rep3_bc24 L1 via Process #97
- └─ 9-R L2 via Process #111
- └─ 3-DBA-CORTEX L3 via Process #115
- └─ DBA-3 L4 via Process #113
All Descendants 1
- └─ C57_DBA_pool_run3 L1 via Process #122
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