Data Transformation: ONT Long-Read Transcriptomics (IsoQuant) (Run #35)
Auto-created from analysis run #35 (cwl pipeline)
Status
Completed
✓
Files
0
📎
Team
0
👥
Used in Studies
1
🔬
Assay Workflow:
Nanopore sequencing of Helicoverpa head and body cDNA libraries
(sequencing assay → this data transformation)
Process Details
- Process ID
#136- Category
- Data_transformation
- Process Date
- February 27, 2026
- Created
- March 17, 2026 am 03:36
- Locked
- Yes
Used in 1 research study:
- Tissue-specific long-read transcriptome profiling of Helicoverpa armigera pupa (Decoding DNA Methylation Dynamics in the Cotton Bollworm (Helicoverpa armigera))
Workflow Inputs
| Input | File | Description |
|---|---|---|
| Fastq | input.fastq.gz |
CWL input file |
| Reference | Helicoverpa_armigera.GCF_030705265.1.dna.fa |
CWL input file |
| Annotation | Helicoverpa_armigera.GCF_030705265.1.gtf |
CWL input file |
Output Files
View Full Results
| File | Format | Size |
|---|---|---|
job.yml |
text/yaml | 354 B |
OUT.transcript_models.gtf |
text/plain | 22.5 MB |
transcripts.fa.transdecoder.gff3 |
text/plain | 6.3 MB |
transcripts.fa.transdecoder.pep |
application/octet-stream | 5.7 MB |
OUT.extended_annotation.gtf |
text/plain | 81.9 MB |
OUT.read_assignments.tsv.gz |
application/octet-stream | 268.7 MB |
OUT.transcript_counts.tsv |
text/tab-separated-values | 534.8 KB |
transcripts.fa.transdecoder.cds |
application/octet-stream | 14.7 MB |
OUT.gene_counts.tsv |
text/tab-separated-values | 296.9 KB |
results_summary.json |
application/json | 6.3 KB |
Pipeline / Analysis Details
Analysis Run
- Run
- #35 — ONT Long-Read Transcriptomics (IsoQuant)
- Status
- succeeded
- Completed
- 2026-02-27 18:25:40
- Pipeline
cwl
Description
Auto-created from analysis run #35 (cwl pipeline)
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Not Reviewed
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