C57_rep1_bc19
- ID
- 370
- Description
- C57BL/6 replicate 1, barcode 19 (group a)
- Origin process
- #97
Annotations 1 slots
strain 1
C57BL/6J
(MGI:3028467)
Linked Sequencing Runs 1
| Platform | Run ID | Linked | Notes | |
|---|---|---|---|---|
| Nanopore | Run #61 | 2026-02-21 17:40:01 | C57_rep1_bc19 | View in QC App |
Analysis Runs 2
| Run | Pipeline | Status | Notes | Completed |
|---|---|---|---|---|
| #54 | Transcript Discovery ONT Long-Read Transcriptomics (IsoQuant) | succeeded | C57BL/6 combined (bc19+bc20+bc21) — GENCODE M35, complete_ge... | 2026-03-01 |
| #3 | Transcript Discovery Mouse Long-Read RNA-Seq (ONT PCR-cDNA) | succeeded | 2026-02-23 |
Comments
Provenance
Source samples (parents)
- 1-R via origin process #111 Simultaneous extraction of DNA and RNA from C57 and DBA cortex tissue using Qiagen AllPrep
Derived samples (children)
- C57_DBA_pool_run1 origin process #119 Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries (run 1)
- C57_rep1_bc10 origin process #121 PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (run 3, bc10-15)
- C57_rep1_bc19_1.5kb origin process #118 AMPure XP 1.5 kb size selection of C57/DBA PCR-cDNA libraries
All ancestors
- 1-R via process #111 Simultaneous extraction of DNA and RNA from C57 and DBA cortex tissue using Qiagen AllPrep
- 1-C57-CORTEX via process #115 Dissection and collection of tissue from 10-week-old male mice (C57/BL6J and DBA/2J) continued
- C57-1 via process #113 Dissection and collection of tissue from 10-week-old male mice (C57/BL6J and DBA/2J)
All descendants
- C57_DBA_pool_run1 origin process #119 Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries (run 1)
- C57_rep1_bc10 origin process #121 PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (run 3, bc10-15)
- C57_rep1_bc19_1.5kb origin process #118 AMPure XP 1.5 kb size selection of C57/DBA PCR-cDNA libraries
- C57_DBA_pool_25fmol origin process #116 Equimolar pooling of C57/DBA barcoded PCR-cDNA libraries
- C57_DBA_pool_run3 origin process #122 Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
Storage
Not currently stored.
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