Software Tools

Results Summary

Peptide Length Distribution

21,122 ORFs | Median: 434 aa | Mean: 508 aa | Max: 2,923 aa

Evidence Tier Distribution

Frame Impact Classification

Top Pfam Domains

Domain Variant Genes (806 genes, multiple architectures after QC)

ORF Type Distribution

Output Files

blastp.tsv HPC 3.3 MB gene_functional_summary.tsv HPC 607.2 KB isoform_annotations.tsv HPC 4.4 MB mouse_all_2017_corrected.fasta.transdecoder.bed HPC 2.4 MB mouse_all_2017_corrected.fasta.transdecoder.cds HPC 33.4 MB mouse_all_2017_corrected.fasta.transdecoder.gff3 HPC 11.8 MB mouse_all_2017_corrected.fasta.transdecoder.pep HPC 12.6 MB pfam.domtblout HPC 13.7 MB rep_besthit.tsv HPC 2.8 MB rep_pfam.tsv HPC 530.2 KB results_summary.json HPC 2.5 KB

Provenance

RO-Crate Metadata (JSON-LD)

Show/hide raw JSON-LD

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        {
            "@id": "./",
            "@type": "Dataset",
            "name": "IsoSeq Functional Annotation (mouse_all_2017) \u2014 Run #108",
            "description": "TransDecoder + Pfam + SwissProt functional annotation of IsoSeq transcripts",
            "datePublished": "2026-03-06",
            "license": {
                "@id": "https://creativecommons.org/licenses/by/4.0/"
            },
            "hasPart": [
                {
                    "@id": "isoform_annotations.tsv"
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                {
                    "@id": "gene_functional_summary.tsv"
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            "name": "blastp.tsv",
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            "contentSize": "3.3 MB",
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        },
        {
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            "endTime": "2026-03-06T01:38:57+00:00",
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}