DBA_rep3_bc15
- ID
- 458
- Description
- DBA rep3 re-barcoded library (bc15) from existing cDNA
- Origin process
- #121
Annotations 1 slots
strain 1
DBA/2J
(MGI:2684695)
Linked Sequencing Runs 1
| Platform | Run ID | Linked | Notes | |
|---|---|---|---|---|
| Nanopore | Run #63 | 2026-02-21 17:54:37 | DBA_rep3_bc24 (run 3) | View in QC App |
Analysis Runs 9
| Run | Pipeline | Status | Notes | Completed |
|---|---|---|---|---|
| #111 | Transcript Discovery ONT Long-Read Transcriptomics (IsoQuant) | failed | — | |
| #110 | Annotation Functional Annotation (TransDecoder + Pfam + SwissProt) | canceled | — | |
| #109 | Transcript Discovery ONT Long-Read Transcriptomics (IsoQuant) | canceled | — | |
| #55 | Transcript Discovery ONT Long-Read Transcriptomics (IsoQuant) | succeeded | DBA/2 combined (bc22+bc23+bc24) — GENCODE M35, complete_gene... | 2026-03-01 |
| #53 | Superseded ONT Isoform Functional Annotation (superseded) | succeeded | Barcode 24 functional annotation | 2026-03-01 |
| #46 | Transcript Discovery ONT Long-Read Transcriptomics (IsoQuant) | succeeded | Barcode 24 analysis | 2026-03-01 |
| #41 | Transcript Discovery ONT Long-Read Transcriptomics (IsoQuant) | failed | Barcode 19 analysis | — |
| #6 | Transcript Discovery Mouse Long-Read RNA-Seq (ONT PCR-cDNA) | succeeded | Trying with the new ubuntu setup | 2026-02-24 |
| #4 | Transcript Discovery Mouse Long-Read RNA-Seq (ONT PCR-cDNA) | succeeded | First time running manually! | 2026-02-23 |
Comments
Provenance
Source samples (parents)
- DBA_rep3_bc24 via origin process #97 PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
Derived samples (children)
- C57_DBA_pool_run3 origin process #122 Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
All ancestors
- DBA_rep3_bc24 via process #97 PCR-cDNA barcoding library preparation for C57/DBA mouse RNA (SQK-PCB111.24)
- 9-R via process #111 Simultaneous extraction of DNA and RNA from C57 and DBA cortex tissue using Qiagen AllPrep
- 3-DBA-CORTEX via process #115 Dissection and collection of tissue from 10-week-old male mice (C57/BL6J and DBA/2J) continued
- DBA-3 via process #113 Dissection and collection of tissue from 10-week-old male mice (C57/BL6J and DBA/2J)
All descendants
- C57_DBA_pool_run3 origin process #122 Equimolar pooling of C57/DBA re-barcoded PCR-cDNA libraries (run 3)
Storage
Not currently stored.
Comments 0
No comments yet.